CDS

Accession Number TCMCG007C38462
gbkey CDS
Protein Id XP_009150520.1
Location join(19391804..19392397,19392477..19392602,19392674..19392871,19392955..19393182,19393270..19394436,19394545..19394823,19394976..19395447,19395538..19396394)
Gene LOC103873865
GeneID 103873865
Organism Brassica rapa

Protein

Length 1306aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009152272.3
Definition rDNA transcriptional regulator pol5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA polymerase phi
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K02331        [VIEW IN KEGG]
EC 2.7.7.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000182        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0000977        [VIEW IN EMBL-EBI]
GO:0000978        [VIEW IN EMBL-EBI]
GO:0000987        [VIEW IN EMBL-EBI]
GO:0001012        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003714        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006360        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006915        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009303        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010942        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022900        [VIEW IN EMBL-EBI]
GO:0022904        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031074        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032922        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0042149        [VIEW IN EMBL-EBI]
GO:0042564        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0042790        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043065        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043068        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070888        [VIEW IN EMBL-EBI]
GO:0071156        [VIEW IN EMBL-EBI]
GO:0071158        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072331        [VIEW IN EMBL-EBI]
GO:0072332        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090068        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097190        [VIEW IN EMBL-EBI]
GO:0097193        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0098781        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000209        [VIEW IN EMBL-EBI]
GO:2000210        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAGTAAGAAGAGAAGCAGCGCCGATTCATCGGAAGATGTCGAGAAGAAGAACCACACCGATTCCTTCATGAAGAAGAAGAAGAAATCCAAGCGTGATAAGATGAACGCTGACGATTCCGATGCCGAGGCGGCGGCCGCGCCTCATCCCGGCGTTGCGTGTACCGGTAAAGACATGGAGAAGAGGAAGAAGAGGAAAGCTTCTGACAAGGAGAGAAAACGCGCCGCTCTCGATAACGACGGCGACCTTCCCCGGCCGGCAAAGCCCCCTGCGGCGGTGGTTTCCGAATCGAACTCCGACGGCCCTGAAACGTCTTCCGCCGCCGCCGCATCTTCCTCTTTGCCGGAGTTGCCTCTTAGCTATTTCAGAGACTTGGCTTCTCCTGAGGGTTCCGTTAGAGAAGCGGCTGCTACCTCATTGGTGACGAGGCTGCAAGAGATTCAGAAGCAGTACGAGATGTTGCCTGATAAGGAATCCGTCGACGGAGGATTGATGCTCGAAGCTGAGAAGAACGACGGTTTGGATAACTGTGCGCCGCATCTCAGATACGCTCTACGGAGGCTTATTCGTGGAGTGTCTTCTTCAAGAGAGTGTGCAAGACAAGGATTTGCTTTGGGGCTGACGTTACCTGTTAGCTTAATCTCTAGCATTAATGTGGAGTCGCTACTGAAGCTCATTTCTGATTCTTTGTCCGTGTCTTCATCCATGAAGGGACAAGATGTGAAAGAATGCTTATTGGGTAGGTTGTTTGCTTATGGGGCCCTAGCACGATCGGGAAGACTAGTTGAAGACTGGAAGTCTGATAAAGACTCTCAGATCATCAAAGAGTTTACCAATGCTCTCATCGGTCTTGCTGCGAAGAAACGTTACTTGCAGGAGCCAGCTGTTCATGTTCTTCTAGATTTTGTTGAGAAGCTGCCTGCTGAAGCTGTTGTGACTCATGTTATGGAAGCTCCAGAGCTTCATAAGTGGTTTGAACAAGCCACCGAGGATGGAAACCCTGATGCTTTGCTCCTAGCGCTCAAGCTCCGTGAGAAGATTTCAGTTGATCATCCTGTCTTTGGCAAGCTTCTACCAGTTCCTTTCAGTTCCGGGAAGTTTTTTTCTGCTGATCATCTCTCAGTCATTGGTGATTGCTTGAAGGAATCTACTTTCTGTCAGCCTCGTGTTCATAGCTTATGGTCTGTCATTCGCGACATGCTGTTGCCGGAAGCTGTTGTTCAAGGCGAAGATGTCTCATCGGCTCCGAGTTCCTCCAAAAAGCAAAAGAGAAACCGCAAGTCCAACCCCATAGAAGAAGAGGCCACAAATAACAGTCGGAGTTTCTGCGAAATTTTTATGGAAGGAACCCTGCTTTCTTCATCTCATGATCGCAAGCATTTGGCATTCGATATCCTGCTTCTTCTTCTCCCAAAGCTCCCTGCCAGTTTCGTCCAACACTTCTTATCGTTGAAGTTTGTTCAGTGCCTCATGGATATACTCTCCACAAAGGACTCTTGGCTGCATAAAGTTGCAACTCATTTCCTCGCGGAGTTGATAGATTGGGTGAAAGACGATGATACCAAGAGGGTGGCTGTTACCATGGCTCTTCAGAAACACAGTGAAGGAAAGTTTGACAATATTACGCGTACAAAAACTGTGAAAGATCTAGCTGCTGATTTTGAAACTGAAGAGGGTTGCACGCTTTTCCTCCAGAACTTGATGAACTTGTTTGTGGATGAACAGCATGTTCCTGAGGAACCTTCAAGTATGAAATGGGCGCTAGAACCTTCCTCTCTCAACTCAGATCAGAGTCAAACAACAGACGATAATTCTGAGATAGGTTCAAACGAGGAGAAGGATTCGATTGGAACAACTGTAAACTCAGATGTTCTGAAAAGCTGGGTCATTGAGTCTCTCCCTGGCATTTTAAAACATGCCAAATTGTCCCCAGAGGCCAAACTACGAGTGCAGAAGCAGATCCTGAAATTTCTAGCTGTTCAAGGTCTATTTGTGGCTTCTCTAGGCACTGAAGTCACGTCATTTGAGTTGCAGGAGAAATTTAAGTGGCCGAAGACAGCTACTCCCACTGCTCTTTGCAAAATGTGCATCGAACAGCTTCAGCTACTGCTGTCGAATTCTCAAAAGATTGAGAATCCGATACCTAAGGAGAGTGGCTTGGAGCAGCCCGAGGATCCTGTTTCCTACTTCATGAAATTTCTTAGCACGCTGCAGAGTATTCCCTCGGTTTCTCTCTTTCGTTCCTTGAATGAAGCAGATGAAAAGGCTGTCAAAGAATTACAAGAAACAGAAAGTAAACTCTCAAAGGAGGAAAGGAATTGTGGATTATCTGCTGATGCAAGTAAGTATCATGCATTGAGGCACTTAGTCGTTCAGCTGTTGCTTCAAATACTCCTCCATCCGGGAGACTTCTCGGAAGCTGCAAGTGAACTTTCAGTATGCTGTGACAAAGCTTTCAGTTCCTCCTCTACTGATGGCGAAGGTGAGGCTGATGGTGAAGAAGAACCAGCAGTCATGGATGTCCTCGTGGACACATTACTTTCTCTCTTGCCACATTCTTCAGCTCCAATGCGATCTTCCATTGAGCAGGTTTTCAAGTACTTCTGTCAAGATGTTACCAATGATGGACTGTTGAGAATGCTACGTGTGATCAAGAAAGATCTAAAACCGGCTAGACATCAGGACGACCAAGACTCTGAGGATCTTGACGATGATGAAGATCTTCTGGCTATTGAAGATGAAGAAGAAGAAGAAGAAAACGAGGAAATGGGTGAGACTGGTGAGAGCGATGATCCAACTGACGATTCTGAAACAGTTACTGGCGTTGCCCGTATGGCAGTTGACAGAGAAGCTCCTGAAAATTCGGATGACTCTGATGACTCTGAAGAAGAAGAAGATGATGGGATGGATGACGATGCAATGTTCCGTATGGACACTTATTTGGCACAGATATTCAAGGAGAAGAGGAATCAAGCTGGCGGCGAAACTGCTCAGTCCCAGCTTGTGCTGTTTAAACTCCGTGTCCTATCCCTTCTCGAAATCTACCTTCATGAAAATCCAGGTAATCCTCAAGTTATGACAGTGTACTTAAACCTAGCTCAGGCACTAGTGAACCCAAGCACTGCAGAAAGTAGTCAGCAGCTTTTACAGCGTATATGGGGTATCATCCAGAAGAAGATCTTCAAGGCTAAAGAGTTATTCAAGGATGAATCTATTGAACTACCTGCACTTGCTTCTTTATTGGAGAAGAATCTTAAACTGGCGGCAAAGCCATTCAAGAGTAAGAAGTCAGGTGTTGATCCTTCCAAGAAGATGCAGTCTGCTGCGTGGAACCGACACAAGATGATCGCTAACCTTGCCCAGAACTCAACCTACTGGGTTCTGAAGATAATCGACTTGAGAAAGTTCTCAGAGACCGAACTGGAGAAGATCGTGGATGTGTTTAGGAGTGTCCTTGTCGGGTACTTTGATAGCAGCAAGAAGTCTCAGATAAAGGTAGACTTTCTTGAGGAAGTGTTTAGAAGGAGACCGTGGATTGCACACCAGCTGTTTGGATTTATTCTGGAGAAAATTGTGAATCCGAAGGTTGAGTATCGTAGAGTGGAAGCTCTTGAATTGATCTCTGAAGCTTTAAGGTCGTTGGCTCCTATAGGCAAAGAGACGCAAGAAGAGTCGAAGAAGAAAATAAAGAGCCATCTGGTGAAACTGAGTCATTTTATTAAAGTGCTTGTTACAAATATGCCGGAGAAGCAAGCAAGGCGGGCTAAGGTGCGGAAGTTCTGTGGCAGGGTCTTTAGAATGGTCTCTTCGTTGAAACTCACCAAGTCTCTCCTCAAGGGTTTGGGAGAAGATGGCCAAACAGCTTGTGAAACTGCACTTGGTCATCTGTTTATGAATCTCAAGAACACTGAGGATTAA
Protein:  
MGSKKRSSADSSEDVEKKNHTDSFMKKKKKSKRDKMNADDSDAEAAAAPHPGVACTGKDMEKRKKRKASDKERKRAALDNDGDLPRPAKPPAAVVSESNSDGPETSSAAAASSSLPELPLSYFRDLASPEGSVREAAATSLVTRLQEIQKQYEMLPDKESVDGGLMLEAEKNDGLDNCAPHLRYALRRLIRGVSSSRECARQGFALGLTLPVSLISSINVESLLKLISDSLSVSSSMKGQDVKECLLGRLFAYGALARSGRLVEDWKSDKDSQIIKEFTNALIGLAAKKRYLQEPAVHVLLDFVEKLPAEAVVTHVMEAPELHKWFEQATEDGNPDALLLALKLREKISVDHPVFGKLLPVPFSSGKFFSADHLSVIGDCLKESTFCQPRVHSLWSVIRDMLLPEAVVQGEDVSSAPSSSKKQKRNRKSNPIEEEATNNSRSFCEIFMEGTLLSSSHDRKHLAFDILLLLLPKLPASFVQHFLSLKFVQCLMDILSTKDSWLHKVATHFLAELIDWVKDDDTKRVAVTMALQKHSEGKFDNITRTKTVKDLAADFETEEGCTLFLQNLMNLFVDEQHVPEEPSSMKWALEPSSLNSDQSQTTDDNSEIGSNEEKDSIGTTVNSDVLKSWVIESLPGILKHAKLSPEAKLRVQKQILKFLAVQGLFVASLGTEVTSFELQEKFKWPKTATPTALCKMCIEQLQLLLSNSQKIENPIPKESGLEQPEDPVSYFMKFLSTLQSIPSVSLFRSLNEADEKAVKELQETESKLSKEERNCGLSADASKYHALRHLVVQLLLQILLHPGDFSEAASELSVCCDKAFSSSSTDGEGEADGEEEPAVMDVLVDTLLSLLPHSSAPMRSSIEQVFKYFCQDVTNDGLLRMLRVIKKDLKPARHQDDQDSEDLDDDEDLLAIEDEEEEEENEEMGETGESDDPTDDSETVTGVARMAVDREAPENSDDSDDSEEEEDDGMDDDAMFRMDTYLAQIFKEKRNQAGGETAQSQLVLFKLRVLSLLEIYLHENPGNPQVMTVYLNLAQALVNPSTAESSQQLLQRIWGIIQKKIFKAKELFKDESIELPALASLLEKNLKLAAKPFKSKKSGVDPSKKMQSAAWNRHKMIANLAQNSTYWVLKIIDLRKFSETELEKIVDVFRSVLVGYFDSSKKSQIKVDFLEEVFRRRPWIAHQLFGFILEKIVNPKVEYRRVEALELISEALRSLAPIGKETQEESKKKIKSHLVKLSHFIKVLVTNMPEKQARRAKVRKFCGRVFRMVSSLKLTKSLLKGLGEDGQTACETALGHLFMNLKNTED